So this seems to apply to me, but I tried to open the tools directory, which gives 403 Forbidden error. If you wish to compile R packages from sources, you will need to download and install those tools - see the tools directory. Important: this release uses Clang 7.0.0 and GNU Fortran 6.1, neither of which is supplied by Apple. Always re-install XQuartz when upgrading your macOS to a new major version. Note: the use of X11 (including tcltk) requires XQuartz to be installed since it is no longer part of OS X. R 3.6.2 was the last version that can be run on Catalina with regular runtime. All others can use regular version which uses the same runtime as previous R releases. MacOS Catalina users must use notarized version which enforces hardened run-time. To compile packages you may have to download tools from the tools directory and read the corresponding note below. Important: since R 3.4.0 release we are now providing binaries for OS X 10.11 (El Capitan) and higher using non-Apple toolkit to provide support for OpenMP and C++17 standard features. I just updated R version 3.6.3 () on my Mac with OS 10.15.2 Catalina. This field value can be considered to be "", i.e., an empty string.I am having some errors when trying to re-install tidyverse after updating R. If the field value is equal to an empty text (i.e., you don't see a value at all, not even NA), then it is likely that the field contained data, but that this has been cleared again. In other words, the field never contained any data for this particular record. If a field value is equal to NA in R, it means that the field never had a value. What is the difference between the two values? This is not an error, neither is it random. Sometimes, the output of a call can return both blanks and NAs. Remotes::install_github("castoredc/castoRedc") Output containing blanks and NAs Install devtools and then use it to install the requested package: Remotes::install_github("castoredc/castoRedc", dependencies=TRUE) To resolve this you can use one of the following methods:įorce the installation of the dependencies at the same time by adding dependencies=TRUE : The most common cause when installing the castoRedc package is the existence of unresolved dependencies. There can be different reasons why this happens, which means there are also different ways to fix this. Receiving this message means that the package was not installed. This message can appear as the result of the installation of a package like Castor EDC : Error: Failed to install 'castoRedc' from GitHub: (converted from warning) installation of package 'later' had non-zero exit status Note: the numbers will be different depending on the dataset When the sizes are incompatible, the following error will appear: Error: Can't recycle `.1` (size 971) to match `.2` (size 0). Recycle() is a function that R applies to match the length of two arguments, usually vectors. To avoid issues due to this mismatch, keep your packages updated, especially the ones that the Castor EDC package depends on: dplyr, tidyr, purr, glue, jsonlite, and httr. It is thus possible to have out-of-date packages installed that will impact the functioning of other packages. Keep packages updatesĪs a general concept it is important to note that R packages get updates separately. This article contains solutions to the most common error messages and issues when using the Castor EDC R Package.
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